AI in Histopathology Explorer

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Title*

Authors

DOI*

Please provide a valid URL.

Published date*

Date must be no earlier than January 1, 1999.

Machine learning task

Image type*

Dataset size *

Data collection techniques*

Argyrophilic nucleolar organizer regions (agnors) stained

Bone marrow smear

Cerebrospinal fluid

Clinical

Cmos sensor

Cytology

Cytometry

Diff-quik

Digital holographic microscopy (dhm)

Dna methylation

Dual in situ hybridization (dish)

Endomicroscopy

Flow cytometry

Fourier ptychographic (fp)

Genomics

Giemsa

H&e

Hemacolor

Hes

High-resolution microendoscope

Holographic flow cytometry

Hps

Hsi

Ihc

In situ hybridisation (ish)

Infrared spectroscopic (ir) imaging

Intraoperative frozen section (ifs)

Lbc

Masson goldner

Massons trichrome

Mgg

Micrographs

Microscopy

Mid-infrared spectroscopic imaging (mirsi)

Mri

Msi

Mueller matrix microscope

Multiphoton microscopy (mpm)

Multiplex

Nlo microscopy

Pap smear

Partial wave spectroscopic microscopy

Phonon microscopy

Pleural fluids

Pricrosirius red

Quantitative phase imaging

Raman

Second-harmonic generation (shg)

Spectroscopy

Srs microscopy

Stimulated raman histology (srh)

Tele-cytology

Transcriptomics

Ultrasound

Ultraviolet photoacoustic remote sensing microscopy

Volumetric laser endomicroscopy

Wright

Wright-giemsa

X-rays

Other

Augmentation techniques

Affine transformation

Autoencoder

Barrel and pincushion distortion

Blurring

Brightness

Ccg-taming transformers

Chroma

Clahe

Color jittering

Color shifting

Compression

Constant

Contrast

Cropping

Cutmix

Cutout

Cyclegan

Deformation

Displacement

Distortion

Edge sharpening

Elastic transformation

Embossing

Fancypca

Flipping

Gamma transformation

Gans

Gaussian blurring

Gaussian filtering

Gaussian noise

Glass blurring

Grayscale

Hed color space perturbation

Hsv variation

Hue

Imagedatagenerator

Intensity variation

Inversion

Jpeg compression

Maximum white balance change

Median blurring

Mixup

Mosaic

Motion blurring

Noise

Normalisation

On-the-fly data augmentation

Optical or grid distortion

Padding

Perspective transformation

Photometric

Progressive sprinkles

Random augmentation

Resizing

Rgb augmentation

Rigid deformation

Rotation

Salt and pepper noise

Saturation

Scaling

Self-proposed

Sharpening

Shearing

Shifting

Shuffle

Skewing

Solarization

Translation

Transposed

Warping

Zca whitening

Zooming

Other

Explainability methods

Ace

Activation map

Activation maximization

Attention map

Attention mechanism

Cam

Cav

Concept based

Deep-dream

Eigen-cam

Fam

Feature based

Feature heatmap

Feature importance

Feature integration

Full-grad

Global normalised-cam

Grad-cam

Grad-cam++

Guided backpropagation (gb)

Guided grad-cam

Heatmap

Integrated gradients

Layer-wise relevance propagation (lrp)

Lime

Occlusion map

Pca

Probability heatmap

Rollout

Saliency map

Scorecam

Shap

Smoothgrad

Task-specific knowledge

Umap

Uncertainty heatmap

bh-SNE

t-SNE

Other

Technique for Data Balancing

Balanced sampling

Bootstrapping multiple classifier

Class weighting

Data augmentation

Differentiate enhancement-random sampling (dees)

Distributed label augmentation

Downsampling

Dynamic sampling

Ensembled classifiers

Equal sampling

Focal loss

Harmonic mean

Ohem

Oversampling

Patch cropping

Smote

Stratified sampling

Tomek links undersampling

Undersampling

Upsampling

Weighted cross entropy

Weighted sampling

Other

Data origin

Aruba

Afghanistan

Angola

Anguilla

Åland Islands

Albania

Andorra

United Arab Emirates

Argentina

Armenia

American Samoa

Antarctica

French Southern Territories

Antigua and Barbuda

Australia

Austria

Azerbaijan

Burundi

Belgium

Benin

Bonaire, Sint Eustatius and Saba

Burkina Faso

Bangladesh

Bulgaria

Bahrain

Bahamas

Bosnia and Herzegovina

Saint Barthélemy

Belarus

Belize

Bermuda

Bolivia, Plurinational State of

Brazil

Barbados

Brunei Darussalam

Bhutan

Bouvet Island

Botswana

Central African Republic

Canada

Cocos (Keeling) Islands

Switzerland

Chile

China

Côte d'Ivoire

Cameroon

Congo, The Democratic Republic of the

Congo

Cook Islands

Colombia

Comoros

Cabo Verde

Costa Rica

Cuba

Curaçao

Christmas Island

Cayman Islands

Cyprus

Czechia

Germany

Djibouti

Dominica

Denmark

Dominican Republic

Algeria

Ecuador

Egypt

Eritrea

Western Sahara

Spain

Estonia

Ethiopia

Finland

Fiji

Falkland Islands (Malvinas)

France

Faroe Islands

Micronesia, Federated States of

Gabon

United Kingdom

Georgia

Guernsey

Ghana

Gibraltar

Guinea

Guadeloupe

Gambia

Guinea-Bissau

Equatorial Guinea

Greece

Grenada

Greenland

Guatemala

French Guiana

Guam

Guyana

Hong Kong

Heard Island and McDonald Islands

Honduras

Croatia

Haiti

Hungary

Indonesia

Isle of Man

India

British Indian Ocean Territory

Ireland

Iran, Islamic Republic of

Iraq

Iceland

Israel

Italy

Jamaica

Jersey

Jordan

Japan

Kazakhstan

Kenya

Kyrgyzstan

Cambodia

Kiribati

Saint Kitts and Nevis

Korea, Republic of

Kuwait

Lao People's Democratic Republic

Lebanon

Liberia

Libya

Saint Lucia

Liechtenstein

Sri Lanka

Lesotho

Lithuania

Luxembourg

Latvia

Macao

Saint Martin (French part)

Morocco

Monaco

Moldova, Republic of

Madagascar

Maldives

Mexico

Marshall Islands

North Macedonia

Mali

Malta

Myanmar

Montenegro

Mongolia

Northern Mariana Islands

Mozambique

Mauritania

Montserrat

Martinique

Mauritius

Malawi

Malaysia

Mayotte

Namibia

New Caledonia

Niger

Norfolk Island

Nigeria

Nicaragua

Niue

Netherlands

Norway

Nepal

Nauru

New Zealand

Oman

Pakistan

Panama

Pitcairn

Peru

Philippines

Palau

Papua New Guinea

Poland

Puerto Rico

Korea, Democratic People's Republic of

Portugal

Paraguay

Palestine, State of

French Polynesia

Qatar

Réunion

Romania

Russian Federation

Rwanda

Saudi Arabia

Sudan

Senegal

Singapore

South Georgia and the South Sandwich Islands

Saint Helena, Ascension and Tristan da Cunha

Svalbard and Jan Mayen

Solomon Islands

Sierra Leone

El Salvador

San Marino

Somalia

Saint Pierre and Miquelon

Serbia

South Sudan

Sao Tome and Principe

Suriname

Slovakia

Slovenia

Sweden

Eswatini

Sint Maarten (Dutch part)

Seychelles

Syrian Arab Republic

Turks and Caicos Islands

Chad

Togo

Thailand

Tajikistan

Tokelau

Turkmenistan

Timor-Leste

Tonga

Trinidad and Tobago

Tunisia

Turkey

Tuvalu

Taiwan, Province of China

Tanzania, United Republic of

Uganda

Ukraine

United States Minor Outlying Islands

Uruguay

United States

Uzbekistan

Holy See (Vatican City State)

Saint Vincent and the Grenadines

Venezuela, Bolivarian Republic of

Virgin Islands, British

Virgin Islands, U.S.

Viet Nam

Vanuatu

Wallis and Futuna

Samoa

Yemen

South Africa

Zambia

Zimbabwe

Data source

Dataset link

Please provide a valid URL.

Is data available

Yes

Upon request

Is code available

Yes

Code link

Please provide a valid URL.

Patients gender

Patients age range

Class labels

Model

Single model

Sequential model

Ensemble model

Network models *

AlexNet

Bayesian

BiSeNet

CBMA

CCL

CNN-Custom

CaffeNet

CapsNet

D-CNN

DBN

DCAS

DF-CNN

DarkNet

Deep Multi-Magnification Network (DMMN)

Deep learning tool

DeepLab

DeepSurv

DenseNet

EfficientNet

FCN

FusionNet

GAN

Generative

GlandNet

Graph-based

HoverNet

Ibex Breast AI Algo

Inception

InceptionResNet

InternImage

LGViT

LSTM

LeNet

LinkNet

Micro-Net

MobileNet

Moco

NASNet

NuClick

PSPNet

R-CNN

RCGCN

RNN

RegNet

ResNet

RetCCL

RetinaNet

SC-CNN

SE-Net

ScanNet

SegNet

ShuffleNet

SimCLR

SqueezeNet

Transformer

U-Net

VGG

Weakly_sup

Weakly_sup_custom

YOLO

Autoencoder

Other

Performance metric*

AUC: